Central Microscopy Research Facility

 

Celebrating 45 Years of Advancing University of Iowa Research

At the University of Iowa's Central Microscopy Research Facility, we provide a wide variety of microscopy techniques for materials and biomedical investigators, an experienced staff, and support for the beginner and experienced investigator. As one of the leading university microscopy facilities in the nation, our microscopy team is ready to support your research program.

 

-------------------- CMRF News --------------------

 

Important Notice Regarding CMRF Operations:

 

As per University directives, to protect our investigators, staff and their families, the CMRF is transitioning to a state of hibernation as of 8am March 23rd.

In exceptional cases of time-critical projects, very limited access MAY be possible. Contact Randy Nessler randy-nessler@uiowa.edu for more information.

Requests for access must be made at least 48 hours in advance through Randy. Only those trained in the independent operation of instrumentation will be considered. If access is approved, short-term prox card access will be granted for the time of the appointment only. This access will be limited to Monday through Friday, 8 am to 5 pm. Single occupancy use of each room is mandatory for these appointments, sorry, no groups. 

Everyone’s health is our priority! Take care and stay well.

Thank you, The CMRF

 

 

Important Notice Regarding Equipment Scheduling!!

The CMRF is moving to a new instrument reservation system, Infinity from Idea Elan. Infinity will streamline the reservation process, and be accessible from on and off campus. Reservations can be made with two clicks via computers and custom Android and iOS apps.

All current CMRF investigators will need to login to Infinity to start the transition:

The login link for UIowa investigators: http://secure7.ideaelan.com/secure/Public/AppLogin.aspx 

The login link for external investigators:https://secure7.ideaelan.com/UIOWA/Public/AppLogin.aspx 

After your initial login you should then touch base with your CMRF staff contact and ask to be added to the Infinity scheduling system for the relevant instruments.

Here is a link to an Infinity User Guide

 

Leica SP8 Confocal-STED Super-resolution System Upgraded

775 nm Depletion Laser Added

The CMRF’s Leica Stimulated Emission Depletion (STED) super-resolution imaging system, based on an SP8 laser scanning confocal microscope, has recently been upgraded. STED delivers resolution beyond the theoretical limit of light, and fills the resolution gap between standard confocal and electron microscopy. The system now features a 775 nm pulsed depletion laser, in addition to the existing 660 nm depletion laser. This addition will simplify multiple label STED experiments, increase resolution (<40 nm), and reduce photobleaching. The STED system also now features a 93x glycerol lens that will facilitate imaging at greater depth. Follow this link for more information on the system, and sample preparation guides.

Below is an example of the dramatic increase in resolution provided by STED. The sample is 23 nm beads labeled with ATTO647N (top two images) and Alexa 594. Confocal images on the left, 775 nm STED on the right. Note the typical diffraction-limited 200 nm spots in the confocal images, and the dramatic resolution improvement in the STED images.

647N-AF594 STED

 

FRAP and FRET Wizard Installed on Leica SP8 Confocal/STED

Also, the CMRF has upgraded the Leica SP8 Confocal/STED microscope with FRAP and FRET software. The new modules use a “Wizard” format to guide you through configuration and data collection. FRAP and FRET software guides can be found on the SP8 website.

 

 High-end Workstation for Huygen's Pro Deconvolution and Imaris 3D and 4D Real-time Interactive Visualization and Analysis Software.

Imaris

 

To process, analyze and visualize STED and confocal data sets, the CMRF maintains current copies of SVI’s Huygen’s Pro and Oxford’s Imaris. Huygen’s is the gold standard deconvolution app, increasing resolution and removing noise from confocal and STED z-stacks. Imaris is the world’s leading 3D-4D image visualization and analysis package, providing sophisticated, easy-to-use volume, distance and tracking modules. Both apps are installed on a custom-built high-end PC workstation.

Huygen's Pro features easy-to-use wizards that guide the user through the deconvolution process. Background flare is removed, and resolution can be be improved by 2x.

With just a few steps, Imaris delivers quantitative volumetric and motion-analysis results. Custom Imaris modules are available for neuroscience, (e.g. dendrite and spine analysis,) and co-localization studies. Other available features include:

  • Imaris Measurement Pro: Shape, size and intensity-based quantification.
  • Imaris Track: Imaging, tracking and motion analysis of live cells and moving objects in 2D and 3D.
  • Imaris Filament Tracer: Automatic detection of neurons (dendritic trees, axons and spines,) microtubules, and other filament-like structures in 2D, 3D and 4D.
  • Imaris Coloc: Quantify and document co-distribution of multiple stained biological components.
  • Imaris Cell: Quantitatively examine micro relationships that exist within and between cells.
  • Imaris Vantage: Compare and contrast experimental groups by visualizing image data in five dimensions as uni- or multi-variate scatterplots.

 

New Paraffin Processor

The CMRF recently installed a Tissue-Tek® VIP® 6 AI Vacuum Infiltration Paraffin Processor. This state-of-the-art system provides reproducible, high-quality processing of histological samples into paraffin.  For more information, contact Chantal at chantal-allamargot@uiowa.edu.

paraffin processor

 

High-Resolution Iridium Sputter Coater Available!

The CMRF has purchased a Quorum Technologies 150T ES Iridium sputter coater to support high-resolution SEM imaging. It is capable of producing coatings that are much thinner than standard Au/Pd sputter coating, which can result in higher-resolution images. The QT 150T ES is the ideal coating system for routine imaging above 50,000x. Contact CMRF staff if you are interested in using this instrument.

Office of the Vice President for Research  article on the 2016 Art in Science Contest

 

CMRF Staff are available  Monday through Friday 8am-5pm and will be happy to assist you! Call 335-8142 or email Randy Nessler for more information.

 

 

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